iMOL Publications

  • Learning-induced biases in the ongoing dynamics of sensory representations predict stimulus generalization. Aschauer DF, Eppler JB, Ewig L, Chambers AR, Pokorny C, Kaschube M, Rumpel S. Cell Reports 2022, 38, http://dx.doi.org/10.1016/j.celrep.2022.110340
  • Modulation of working memory duration by synaptic and astrocytic mechanisms. Becker S, Nold A, Tchumatchenko T. PLoS Computational Biology 2022, 18, e1010543. http://dx.doi.org/10.1371/journal.pcbi.1010543
  • Expansion microscopy of mouse brain organotypic slice cultures to study protein distribution. Bissen D, Kracht MK, Foss F, Acker-Palmer A. STAR Protocols 2022, 3, 101507. http://dx.doi.org/https://doi.org/10.1016/j.xpro.2022.101507
  • Mean curvature motion facilitates the segmentation and surface visualization of electron tomograms. Frangakis AS. Journal of Structural Biology 2022, 214, 107833. http://dx.doi.org/https://doi.org/10.1016/j.jsb.2022.107833
  • SEDDS-loaded mucoadhesive fiber patches for advanced oromucosal delivery of poorly soluble drugs. Friedl JD, Walther M, Vestweber PK, Wachter J, Knoll P, Joergensen AM, Bernkop-Schnuerch A, Windbergs M. Journal of Controlled Release 2022, 348, 692-705. http://dx.doi.org/10.1016/j.jconrel.2022.06.023
  • Application of confocal Raman microscopy for the characterization of topical semisolid formulations and their penetration into human skin ex vivo. Jung N, Namjoshi S, Mohammed Y, Grice JE, Benson HAE, Raney SG, Roberts MS, Windbergs M. Pharmaceutical Research 2022, 39, 935-948. http://dx.doi.org/10.1007/s11095-022-03245-7
  • Assessing antigen presentation on the surface of Plasmodium falciparum-infected erythrocytes by photoactivated localization microscopy (PALM). Karathanasis C, Sanchez CP, Heilemann M, Lanzer M. In: ATR Jensen, L Hviid (eds). Malaria Immunology: Targeting the Surface of Infected Erythrocytes. 2022. Springer US, New York, NY, pp 457-466. http://dx.doi.org/10.1007/978-1-0716-2189-9_34
  • Biochemical characterization of cell-free synthesized human β1 adrenergic receptor cotranslationally inserted into nanodiscs. Köck Z, Ermel U, Martin J, Morgner N, Achilleas Frangakis S, Dötsch V, Hilger D, Bernhard F. Journal of Molecular Biology 2022, 167687. http://dx.doi.org/https://doi.org/10.1016/j.jmb.2022.167687
  • In vivo extracellular recordings of thalamic and cortical visual responses reveal V1 connectivity rules. Kraynyukova N, Renner S, Born G, Bauer Y, Spacek MA, Tushev G, Busse L, Tchumatchenko T. Proceedings of the National Academy of Sciences USA 2022, 119, e2207032119. http://dx.doi.org/doi:10.1073/pnas.2207032119
  • Fast DNA-PAINT imaging using a deep neural network. Narayanasamy KK, Rahm JV, Tourani S, Heilemann M. Nature Communications 2022, 13, 5047. http://dx.doi.org/10.1038/s41467-022-32626-0
  • Electrospun scaffolds as cell culture substrates for the cultivation of an in vitro blood-brain barrier model using human induced pluripotent stem cells. Rohde F, Danz K, Jung NA, Wagner S, Windbergs M. Pharmaceutics 2022, 14, 22. http://dx.doi.org/10.3390/pharmaceutics14061308
  • In-situ tear fluid dissolving nanofibers enable prolonged viscosity-enhanced dual drug delivery to the eye. Rohde F, Walther M, Wachter J, Knetzger N, Lotz C, Windbergs M. International Journal of Pharmaceutics 2022, 616, 12. http://dx.doi.org/10.1016/j.ijpharm.2022.121513
  • DeepBacs for multi-task bacterial image analysis using open-source deep learning approaches. Spahn C, Gómez-de-Mariscal E, Laine RF, Pereira PM, von Chamier L, Conduit M, Pinho MG, Jacquemet G, Holden S, Heilemann M, Henriques R. Communications Biology 2022, 5, 688. http://dx.doi.org/10.1038/s42003-022-03634-z
  • In toto light sheet fluorescence microscopy live imaging datasets of Ceratitis capitata embryonic development. Strobl F, Schetelig MF, Stelzer EHK. Scientific Data 2022, 9, 340. http://dx.doi.org/10.1038/s41597-022-01443-x
  • Synaptic plasticity controls the emergence of population-wide invariant representations in balanced network models. Timon LB, Ekelmans P, Konrad S, Nold A, Tchumatchenko T. Physical Review Research 2022, 4, 14. http://dx.doi.org/10.1103/PhysRevResearch.4.013162
  • Physico-chemical analysis of electrospun fibers-A systematic approach. Walther M, Rohde F, Kielholz T, Windbergs M. European Journal of Pharmaceutics and Biopharmaceutics 2022, 171, 60-71. http://dx.doi.org/10.1016/j.ejpb.2022.01.001
  • Dopamine and serotonin interplay for valence-based spatial learning. Wert-Carvajal C, Reneaux M, Tchumatchenko T, Clopath C. Cell Reports 2022, 39, 16. http://dx.doi.org/10.1016/j.celrep.2022.110645
  • Cyclophilin anaCyp40 regulates photosystem assembly and phycobilisome association in a cyanobacterium. Yadav S, Centola M, Glaesmann M, Pogoryelov D, Ladig R, Heilemann M, Rai LC, Yildiz Ö, Schleiff E. Nature Communications 2022, 13, 1690. http://dx.doi.org/10.1038/s41467-022-29211-w
  • Towards a Better Understanding of verapamil Release from Kollicoat SR:IR Coated Pellets Using Non-Invasive Analytical Tools. Fahier J, Vukosavljevic B, De Kinder L, Florin H, Goossens JF, Windbergs M, Siepmann F, Siepmann J, Muschert S. Pharmaceutics 2021, 13, 19. http://dx.doi.org/10.3390/pharmaceutics13101723
  • Long-term live imaging and multiscale analysis identify heterogeneity and core principles of epithelial organoid morphogenesis. Hof L, Moreth T, Koch M, Liebisch T, Kurtz M, Tarnick J, Lissek SM, Verstegen MMA, van der Laan LJW, Huch M, Matthäus F, Stelzer EHK, Pampaloni F. BMC Biology 2021, 19, 37. http://dx.doi.org/10.1186/s12915-021-00958-w
  • Non-invasive analysis of pancreas organoids in synthetic hydrogels defines material-cell interactions and luminal composition. Jung N, Moreth T, Stelzer EHK, Pampaloni F, Windbergs M. Biomaterials Science 2021, 9, 5485-5496. http://dx.doi.org/10.1039/d1bm00597a
  • Therapy of infected wounds: overcoming clinical challenges by advanced drug delivery systems. Kaiser P, Wachter J, Windbergs M. Drug Delivery and Translational Research 2021, 11, 1545-1567. http://dx.doi.org/10.1007/s13346-021-00932-7
  • An initiator- and catalyst-free hydrogel coating process for 3D printed medical-grade poly(epsilon-caprolactone). Loblein J, Lorson T, Komma M, Kielholz T, Windbergs M, Dalton PD, Luxenhofer R. Beilstein Journal of Organic Chemistry 2021, 17, 2095-2101. http://dx.doi.org/10.3762/bjoc.17.136
  • The angiopoietin-Tie2 pathway regulates Purkinje cell dendritic morphogenesis in a cell-autonomous manner. Luck R, Karakatsani A, Shah B, Schermann G, Adler H, Kupke J, Tisch N, Jeong H-W, Back MK, Hetsch F, D’Errico A, De Palma M, Wiedtke E, Grimm D, Acker-Palmer A, von Engelhardt J, Adams RH, Augustin HG, Ruiz de Almodóvar C. Cell Reports 2021, 36, 109522. http://dx.doi.org/https://doi.org/10.1016/j.celrep.2021.109522
  • Universal quenching of common fluorescent probes by water and alcohols. Maillard J, Klehs K, Rumble C, Vauthey E, Heilemann M, Fürstenberg A. Chemical Science 2021, 12, 1352-1362. http://dx.doi.org/10.1039/D0SC05431C
  • Transglutaminase 2 promotes tumorigenicity of colon cancer cells by inactivation of the tumor suppressor p53. Malkomes P, Lunger I, Oppermann E, Abou-El-Ardat K, Oellerich T, Günther S, Canbulat C, Bothur S, Schnütgen F, Yu W, Wingert S, Haetscher N, Catapano C, Dietz MS, Heilemann M, Kvasnicka H-M, Holzer K, Serve H, Bechstein WO, Rieger MA. Oncogene 2021, http://dx.doi.org/10.1038/s41388-021-01847-w
  • Ex vivo visualization of RNA polymerase III-specific gene activity with electron microscopy. Manger S, Ermel UH, Frangakis AS. Communications Biology 2021, 4, 234. http://dx.doi.org/10.1038/s42003-021-01752-8
  • Tightly coupled inhibitory and excitatory functional networks in the developing primary visual cortex. Mulholland HN, Hein B, Kaschube M, Smith GB. eLife 2021, 10, http://dx.doi.org/10.7554/eLife.72456; 10.7554/eLife.72456.sa1; 10.7554/eLife.72456.sa2
  • Visualizing synaptic multi-protein patterns of neuronal tissue with DNA-assisted single-molecule localization microscopy. Narayanasamy KK, Stojic A, Li Y, Sass S, Hesse MR, Deussner-Helfmann NS, Dietz MS, Kuner T, Klevanski M, Heilemann M. Frontiers in Synaptic Neuroscience 2021, 13, 671288-671288. http://dx.doi.org/10.3389/fnsyn.2021.671288
  • Neurovascular crosstalk coordinates the central nervous system development. Peguera B, Segarra M, Acker-Palmer A. Current Opinion in Neurobiology 2021, 69, 202-213. http://dx.doi.org/https://doi.org/10.1016/j.conb.2021.04.005
  • QuickPIV: Efficient 3D particle image velocimetry software applied to quantifying cellular migration during embryogenesis. Pereyra M, Drusko A, Krämer F, Strobl F, Stelzer EHK, Matthäus F. BMC Bioinformatics 2021, 22, 579. http://dx.doi.org/10.1186/s12859-021-04474-0
  • Blood-brain barrier dynamics to maintain brain homeostasis. Segarra M, Aburto MR, Acker-Palmer A. Trends in Neurosciences 2021, http://dx.doi.org/10.1016/j.tins.2020.12.002
  • Light sheet fluorescence microscopy. Stelzer EHK, Strobl F, Chang B-J, Preusser F, Preibisch S, McDole K, Fiolka R,. Nature Reviews Methods Primers 2021, 1, 73. http://dx.doi.org/https://doi.org/10.1038/s43586-021-00069-4
  • A deterministic genotyping workflow reduces waste of transgenic individuals by two-thirds. Strobl F, Stelzer EHK. Scientific Reports 2021, 11, 15325. http://dx.doi.org/10.1038/s41598-021-94288-0
  • The prevalence and specificity of local protein synthesis during neuronal synaptic plasticity. Sun C, Nold A, Fusco CM, Rangaraju V, Tchumatchenko T, Heilemann M, Schuman EM. Science Advances 2021, 7, 13. http://dx.doi.org/10.1126/sciadv.abj0790
  • Microbial cationic peptides as a natural defense mechanism against insect antimicrobial peptides. Vo TD, Spahn C, Heilemann M, Bode HB. ACS Chemical Biology 2021, http://dx.doi.org/10.1021/acschembio.0c00794
  • Democratising deep learning for microscopy with ZeroCostDL4Mic. von Chamier L, Laine RF, Jukkala J, Spahn C, Krentzel D, Nehme E, Lerche M, Hernández-Pérez S, Mattila PK, Karinou E, Holden S, Solak AC, Krull A, Buchholz T-O, Jones ML, Royer LA, Leterrier C, Shechtman Y, Jug F, Heilemann M, Jacquemet G, Henriques R. Nature Communications 2021, 12, 2276. http://dx.doi.org/10.1038/s41467-021-22518-0
  • Quantitative single-molecule imaging of TNFR1 reveals zafirlukast as antagonist of TNFR1 clustering and TNF alpha-induced NF-& x138;B signaling. Weinelt N, Karathanasis C, Smith S, Medler J, Malkusch S, Fulda S, Wajant H, Heilemann M, van Wijk SJL. Journal of Leukocyte Biology 2021, 109, 363-371. http://dx.doi.org/10.1002/jlb.2ab0420-572rr
  • Structure and mechanism of the Nap adhesion complex from the human pathogen Mycoplasma genitalium. Aparicio D, Scheffer MP, Marcos-Silva M, Vizarraga D, Sprankel L, Ratera M, Weber MS, Seybert A, Torres-Puig S, Gonzalez-Gonzalez L, Reitz J, Querol E, Piñol J, Pich OQ, Fita I, Frangakis AS. Nature Communications 2020, 11, 2877. http://dx.doi.org/10.1038/s41467-020-16511-2
  • Carotid body Type I cells engage flavoprotein and Pin1 for oxygen sensing. Bernardini A, Wolf A, Brockmeier U, Riffkin H, Metzen E, Acker-Palmer A, Fandrey J, Acker H. American Journal of Physiology – Cell Physiology 2020, http://dx.doi.org/10.1152/ajpcell.00320.2019
  • SARS-CoV-2 infects and induces cytotoxic effects in human cardiomyocytes. Bojkova D, Wagner JUG, Shumliakivska M, Aslan GS, Saleem U, Hansen A, Luxán G, Günther S, Pham MD, Krishnan J, Harter PN, Ermel UH, Frangakis AS, Milting H, Zeiher AM, Klingel K, Cinatl J, Dendorfer A, Eschenhagen T, Tschöpe C, Ciesek S, Dimmeler S. Cardiovascular Research 2020, http://dx.doi.org/10.1093/cvr/cvaa267
  • Red light-triggered photoreduction on a nucleic acid template. Dutta S, Ruehle J, Schikora M, Deussner-Helfmann N, Heilemann M, Zatsepin T, Duchstein P, Zahn D, Knoer G, Mokhir A. Chemical Communications 2020, 56, 10026-10029. http://dx.doi.org/10.1039/d0cc03086d
  • The transition from local to global patterns governs the differentiation of mouse blastocysts. Fischer SC, Corujo-Simon E, Lilao-Garzon J, Stelzer EHK, Muñoz-Descalzo S. PLoS One 2020, 15, e0233030. http://dx.doi.org/10.1371/journal.pone.0233030
  • p63 uses a switch-like mechanism to set the threshold for induction of apoptosis. Gebel J, Tuppi M, Chaikuad A, Hötte K, Schröder M, Schulz L, Löhr F, Gutfreund N, Finke F, Henrich E, Mezhyrova J, Lehnert R, Pampaloni F, Hummer G, Stelzer EHK, Knapp S, Dötsch V. Nature Chemical Biology 2020, 16, 1078-1086. http://dx.doi.org/10.1038/s41589-020-0600-3
  • Multi-color, bleaching-resistant super-resolution optical fluctuation imaging with oligonucleotide-based exchangeable fluorophores. Glogger M, Spahn C, Enderlein J, Heilemann M. Angewandte Chemie 2020, http://dx.doi.org/10.1002/anie.202013166
  • p120-catenin-dependent collective brain infiltration by glioma cell networks. Gritsenko PG, Atlasy N, Dieteren CEJ, Navis AC, Venhuizen JH, Veelken C, Schubert D, Acker-Palmer A, Westerman BA, Wurdinger T, Leenders W, Wesseling P, Stunnenberg HG, Friedl P. Nature Cell Biology 2020, 22, 97-107. http://dx.doi.org/10.1038/s41556-019-0443-x
  • Selective modulator of peroxisome proliferator-activated receptor gamma with an unprecedented binding mode. Hanke T, Cheung SY, Kilu W, Heering J, Ni XM, Planz V, Schierle S, Faudone G, Friedrich M, Wanior M, Werz O, Windbergs M, Proschak E, Schubert-Zsilavecz M, Chaikuad A, Knapp S, Merk D. Journal of Medicinal Chemistry 2020, 63, 4555-4561. http://dx.doi.org/10.1021/acs.jmedchem.9b01786
  • Single-molecule super-resolution microscopy reveals heteromeric complexes of MET and EGFR upon ligand activation. Harwardt M-LIE, Schroeder MS, Li Y, Malkusch S, Freund P, Gupta S, Janjic N, Strauss S, Jungmann R, Dietz MS, Heilemann M. International Journal of Molecular Sciences 2020, 21, http://dx.doi.org/10.3390/ijms21082803
  • First structure-activity relationship study of potent BLT2 agonists as potential wound-healing promoters. Hernandez-Olmos V, Heering J, Planz V, Liu T, Kaps A, Rajkumar R, Gramzow M, Kaiser A, Schubert-Zsilavecz M, Parnham MJ, Windbergs M, Steinhilber D, Proschak E. Journal of Medicinal Chemistry 2020, 63, 11548-11572. http://dx.doi.org/10.1021/acs.jmedchem.0c00588
  • Quantitative single-molecule localization microscopy reports on protein numbers in signaling protein complexes. Karathanasis C, Baldering TN, Boeger C, Harwardt M-LIE, Li Y, Schroeder MS, Deussner-Helfmann NS, Glaesmann M, Malkusch S, Dietz MS, Hafner A-S, Schuman E, Hummer G, Heilemann M. In: I Gregor, F Koberling, R Erdmann (eds). Single Molecule Spectroscopy and Superresolution Imaging XIII. 2020. (Proceedings of SPIE vol 11246). http://dx.doi.org/10.1117/12.2550635
  • Single-molecule imaging reveals the oligomeric state of functional TNFalpha-induced plasma membrane TNFR1 clusters in cells. Karathanasis C, Medler J, Fricke F, Smith S, Malkusch S, Widera D, Fulda S, Wajant H, van Wijk SJL, Dikic I, Heilemann M. Science Signaling 2020, 13, published online 16 January 2020. http://dx.doi.org/10.1126/scisignal.aax5647
  • Automated highly multiplexed super-resolution imaging of protein nano-architecture in cells and tissues. Klevanski M, Herrmannsdoerfer F, Sass S, Venkataramani V, Heilemann M, Kuner T. Nature Communications 2020, 11, http://dx.doi.org/10.1038/s41467-020-15362-1
  • A mechanochemical model for rho GTPase mediated cell polarization. Kopfer KH, Jager W, Matthäus F. Journal of Theoretical Biology 2020, 504, 13. http://dx.doi.org/10.1016/j.jtbi.2020.110386
  • Specific, targetable interactions with the microenvironment influence imatinib-resistant chronic myeloid leukemia. Kumar R, Pereira RS, Zanetti C, Minciacchi VR, Merten M, Meister M, Niemann J, Dietz MS, Ruessel N, Schnuetgen F, Tamai M, Akahane K, Inukai T, Oellerich T, Kvasnicka HM, Pfeifer H, Nicolini FE, Heilemann M, Van Etten RA, Krause DS. Leukemia 2020, 34, 2087-2101. http://dx.doi.org/10.1038/s41375-020-0866-1
  • Cell fate clusters in ICM organoids arise from cell fate heredity and division: a modelling approach. Liebisch T, Drusko A, Mathew B, Stelzer EHK, Fischer SC, Matthäus F. Scientific Reports 2020, 10, 11. http://dx.doi.org/10.1038/s41598-020-80141-3
  • Nonlinear response characteristics of neural networks and single neurons undergoing optogenetic excitation. Luboeinski J, Tchumatchenko T. Network Neuroscience 2020, 4, 852-870. http://dx.doi.org/10.1162/netn_a_00154
  • Single-molecule analysis reveals agonist-specific dimer formation of µ-opioid receptors. Möller J, Isbilir A, Sungkaworn T, Osberg B, Karathanasis C, Sunkara V, Grushevskyi EO, Bock A, Annibale P, Heilemann M, Schütte C, Lohse MJ. Nature Chemical Biology 2020, http://dx.doi.org/10.1038/s41589-020-0566-1
  • How repair-or-dispose decisions under stress can initiate disease progression. Nold A, Batulin D, Birkner K, Bittner S, Tchumatchenko T. iScience 2020, 23, 31. http://dx.doi.org/10.1016/j.isci.2020.101701
  • Current progress in particle-based systems for transdermal vaccine delivery. Pielenhofer J, Sohl J, Windbergs M, Langguth P, Radsak MP. Frontiers in Immunology 2020, 11, 8. http://dx.doi.org/10.3389/fimmu.2020.00266
  • Measuring stepwise binding of thermally fluctuating particles to cell membranes without fluorescence. Rohrbach A, Meyer T, Stelzer EHK, Kress H. Biophysical Journal 2020, 118, 1850-1860. http://dx.doi.org/10.1016/j.bpj.2020.03.005
  • Statistical laws of protein motion in neuronal dendritic trees. Sartori F, Hafner AS, Karimi A, Nold A, Fonkeu Y, Schuman EM, Tchumatchenko T. Cell Reports 2020, 33, 18. http://dx.doi.org/10.1016/j.celrep.2020.108391
  • Imaging the fibroblast growth factor receptor network on the plasma membrane with DNA-assisted single-molecule super-resolution microscopy. Schroder MS, ML IEH, Rahm JV, Li Y, Freund P, Dietz MS, Heilemann M. Methods 2020, http://dx.doi.org/10.1016/j.ymeth.2020.05.004
  • Cysteine oxidation and disulfide formation in the ribosomal exit tunnel. Schulte L, Mao J, Reitz J, Sreeramulu S, Kudlinzki D, Hodirnau VV, Meier-Credo J, Saxena K, Buhr F, Langer JD, Blackledge M, Frangakis AS, Glaubitz C, Schwalbe H. Nature Communications 2020, 11, 5569. http://dx.doi.org/10.1038/s41467-020-19372-x
  • Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography. Sikora M, Ermel UH, Seybold A, Kunz M, Calloni G, Reitz J, Vabulas RM, Hummer G, Frangakis AS. Proceedings of the National Academy of Sciences USA 2020, 117, 27132-27140. http://dx.doi.org/10.1073/pnas.2004563117
  • A survey of within-host and between-hosts modelling for antibiotic resistance. Tetteh JNA, Matthäus F, Hernandez-Vargas EA. Biosystems 2020, 196, 13. http://dx.doi.org/10.1016/j.biosystems.2020.104182
  • Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae. Vizarraga D, Kawamoto A, Matsumoto U, Illanes R, Perez-Luque R, Martin J, Mazzolini R, Bierge P, Pich OQ, Espasa M, Sanfeliu I, Esperalba J, Fernandez-Huerta M, Scheffer MP, Pinyol J, Frangakis AS, Lluch-Senar M, Mori S, Shibayama K, Kenri T, Kato T, Namba K, Fita I, Miyata M, Aparicio D. Nature Communications 2020, 11, 16. http://dx.doi.org/10.1038/s41467-020-18777-y
  • Inhibition of tumor VEGFR2 induces serine 897 EphA2-dependent tumor cell invasion and metastasis in NSCLC. Volz C, Breid S, Selenz C, Zaplatina A, Golfmann K, Meder L, Dietlein F, Borchmann S, Chatterjee S, Siobal M, Schottle J, Florin A, Koker M, Nill M, Ozretic L, Uhlenbrock N, Smith S, Buttner R, Miao H, Wang B, Reinhardt HC, Rauh D, Hallek M, Acker-Palmer A, Heukamp LC, Ullrich RT. Cell Reports 2020, 31, 107568. http://dx.doi.org/10.1016/j.celrep.2020.107568
  • Early developmental plasticity of lateral roots in response to asymmetric water availability. von Wangenheim D, Banda J, Schmitz A, Boland J, Bishopp A, Maizel A, Stelzer EHK, Bennett M. Nature Plants 2020, 6, 73-77. http://dx.doi.org/10.1038/s41477-019-0580-z
  • Controlling supramolecular structures of drugs by light. Wiest J, Kehrein J, Saedtler M, Schilling K, Cataldi E, Sotriffer CA, Holzgrabe U, Rasmussen T, Bottcher B, Cronin-Golomb M, Lehmann M, Jung N, Windbergs M, Meinel L. Molecular Pharmaceutics 2020, 17, 4704-4708. http://dx.doi.org/10.1021/acs.molpharmaceut.0c00720

Selected publications of the members of iMOL prior to 2020

  • Endothelial Dab1 signaling orchestrates neuro-glia-vessel communication in the central nervous system. Segarra M, Aburto MR, Cop F, Llaó-Cid C, Härtl R, Damm M, Bethani I, Parrilla M, Husainie D, Schänzer A, Schlierbach H, Acker T, Mohr L, Torres-Masjoan L, Ritter M, Acker-Palmer A. Science 2018, 361:6404.
  • GRIP1 regulates ApoER2/ephrinB2 functions at the synapse. Pfennig S#, Foss F#, Bissen D, Harde E, TreeckJ, Segarra M and Acker-Palmer A. Cell Reports 2017, 21:84-96.
  • EphrinB2 repression mediates tumor invasion and evasive resistance to anti-angiogenesis. Depner C, ZumButtel H, Böğürcü N, Cuesta AM, Aburto MR, Seidel S, Finkelmeier F, Foss F, Hofmann J, Kaulich K, Barbus S, Segarra M, Reifenberger G, Garvalov BK, Acker T,* Acker-Palmer A*. Nature Communications 2016, 7:12329 *equal contribution.
  • Loss of PHD3 allows tumours to overcome hypoxic growth inhibition and sustain proliferation through EGFR. Henze AT, Garvalov BK, Seidel S, Cuesta A, Ritter M, Filatova A, Foss F, Dopeso H, Essmann CL, Maxwell PH, Reifenberger G, Carmeliet P, Acker-Palmer A*, Acker T*. Nature Communications 2014, 5:5582 *equal contribution.
  • PHD3 regulates EGFR internalization and signaling in tumours. Garvalov BK*, Foss F*, Henze, AT, Bethani I, Gräf-Höchst S, Singh D, Filatova A, Dopeso H, Seidel S, Damm M, Acker-Palmer A*, Acker T*. Nature Communications 2014, 5:5577 *equal contribution.
  • The GRIP1/14-3-3 pathway coordinates cargo trafficking and dendrite development. Geiger JC, Lipka J, Segura I, Hoyer S, Schlager MA, Wulf PS, Weinges S, Demmers J, Hoogenraad CC, Acker-Palmer A. Developmental Cell 2014, 28:381-393.
  • EphrinBs are essential components of the Reelin pathway to regulate neuronal migration. Senturk A., Pfennig S, Weiss A, Burk K, Acker-Palmer, A. Nature 2011, 472:356-60 (Erratum 478:274).
  • EphrinB2 regulates VEGFR2 function in developmental and tumour angiogenesis. Sawamiphak S, Seidel S, Essmann CL, Wilkinson G, Pitulescu ME, Acker T, Acker-Palmer A. Nature 2010, 465:487-491.
  • Serine phosphorylation of ephrinB2 regulates trafficking of synaptic AMPA receptors. Essmann CL, Martinez E, Geiger J, Zimmer M, Traut M, Stein V, Klein R, Acker-Palmer A. Nature Neuroscience 2008, 11:1035-1043.
  • Grb4 and GIT1 transduce ephrinB reverse signals modulating spine morphogenesis and synapse formation. Segura I, Essmann CL, Weinges S, Acker-Palmer A. Nature Neuroscience 2007, 10:301-310.
  • Cryo-electron tomography analyses of terminal organelle mutants suggest the motility mechanism of Mycoplasma genitalium. Seybert A, Gonzalez-Gonzalez L, Scheffer MP, Lluch-Senar M, Mariscal AM,Querol E, Matthaeus F, Piñol J, Frangakis AS. Molecular Microbiology 2018, 319-329. doi: 10.1111/mmi.13938.
  • Structural characterization of the NAP; the major adhesion complex of the human pathogen Mycoplasma genitalium. Scheffer MP, Gonzalez-Gonzalez L, Seybert A, Ratera M, Kunz M, Valpuesta JM, Fita I, Querol E, Piñol J, Martín-Benito J, Frangakis AS. Molecular Microbiology 2017, 105, 869-879.
  • Structure of RNA polymerase I transcribing ribosomal DNA genes. Neyer S, Kunz M, Geiss C, Hantsche M; Hodirnau VV, Seybert A, Engel C, Scheffer MP, Cramer P, Frangakis AS. Nature 2016, 540, 607-610.
  • Three-dimensional CTF correction improves the resolution of electron tomograms. Kunz M, Frangakis AS. J Structural Biology 2016, 197, 114-122.
  • Quantitative analysis of cytoskeletal reorganization during epithelial tissue sealing by large-volume electron tomography. Eltsov M, Dubé N, Yu Z, Pasakarnis L, Haselmann-Weiss U, Brunner D, Frangakis AS. Nature Cell Biology 2015, 17, 605-614.
  • Super-sampling SART with ordered subsets. Kunz M, Frangakis AS. J Structural Biology 2014, 188, 107-115.
  • M-free: scoring the reference bias in sub-tomogram averaging and template matching. Yu Z, Frangakis AS. J Structural Biology 2014, 187, 10-19.
  • Correlative Light- and Electron Microscopy with chemical tags. Perkovic M, Kunz M, Endesfelder U, Bunse S, Wigge C, Yu Z, Hodirnau VV, SchefferMP, Seybert A, Malkusch S, Schuman EM, Heilemann M, FrangakisAS. J Structural Biology 2014, 186, 205-213.
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